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A call to DataObject.getRegistry().getModified() does not return modified objects. There's no other API for this AFAIK. Submitted as a separate regression issue according to Trung's comments. See issue #36280 for details.
As described in http://www.netbeans.org/servlets/ReadMsg?msgId=619519&listName=nbdiscuss the current work on projects prototype has been stopped.
Marking issue as VERIFIED --->
---> CLOSED