Ubuntu 5.10 running on a laptop, using JDK5u5 and NB 5.5b2.  Using JBoss
4.0.4GAPatch1 with the EJB3 support installed.

I've seen a problem similar to this on WinXP, but it was fixed long ago.

1. Add the JBoss server via Server Manager
2. Start it using the context menu in the Runtime window - it starts up fine, no
errors reported.
3. Try to stop it using the context menu in the Runtime window.  It never gets
stopped and the Runtime window continues to show a little green arrow next to it. 

The progress bar in the lower-right corner of the IDE's window displays for
quite a while, and then it just goes away and I'm left with a server that is
still running.

No messages of any kind in the NB messages.log.

The Output window in the IDE has the messages from when JBoss was started, but
no messages are written when the shutdown request was done, which seems odd:

=========================================================================

  JBoss Bootstrap Environment

  JBOSS_HOME: /home/gs145266/tools/jboss/4.0.4/Patch1

  JAVA: /home/gs145266/tools/jdk/5/jdk1.5.0_06/bin/java

  JAVA_OPTS:  -Dhttp.proxyHost= -Dhttp.proxyPort=
-Dhttp.nonProxyHosts="localhost|127.0.0.1|dhcp-uaus09-130-6|localhost.localdomain"
-Dhttps.proxyHost= -Dhttps.proxyPort= -Dprogram.name=run.sh

  CLASSPATH:
/home/gs145266/tools/jboss/4.0.4/Patch1/bin/run.jar:/home/gs145266/tools/jdk/5/jdk1.5.0_06/lib/tools.jar

=========================================================================

20:55:59,763 INFO  [Server] Starting JBoss (MX MicroKernel)...
20:55:59,767 INFO  [Server] Release ID: JBoss [Zion] 4.0.4.GA (build:
CVSTag=JBoss_4_0_4_GA date=200605151000)
20:55:59,770 INFO  [Server] Home Dir: /home/gs145266/tools/jboss/4.0.4/Patch1
20:55:59,770 INFO  [Server] Home URL: file:/home/gs145266/tools/jboss/4.0.4/Patch1/
20:55:59,772 INFO  [Server] Patch URL: null
20:55:59,772 INFO  [Server] Server Name: default
20:55:59,772 INFO  [Server] Server Home Dir:
/home/gs145266/tools/jboss/4.0.4/Patch1/server/default
20:55:59,773 INFO  [Server] Server Home URL:
file:/home/gs145266/tools/jboss/4.0.4/Patch1/server/default/
20:55:59,773 INFO  [Server] Server Log Dir:
/home/gs145266/tools/jboss/4.0.4/Patch1/server/default/log
20:55:59,773 INFO  [Server] Server Temp Dir:
/home/gs145266/tools/jboss/4.0.4/Patch1/server/default/tmp
20:55:59,774 INFO  [Server] Root Deployment Filename: jboss-service.xml
20:56:00,790 INFO  [ServerInfo] Java version: 1.5.0_06,Sun Microsystems Inc.
20:56:00,791 INFO  [ServerInfo] Java VM: Java HotSpot(TM) Client VM
1.5.0_06-b05,Sun Microsystems Inc.
20:56:00,791 INFO  [ServerInfo] OS-System: Linux 2.6.12-9-386,i386
20:56:01,199 INFO  [Server] Core system initialized
20:56:02,541 INFO  [Log4jService$URLWatchTimerTask] Configuring from URL:
resource:log4j.xml
20:56:03,787 INFO  [SocketServerInvoker] Invoker started for locator:
InvokerLocator [socket://127.0.0.1:3873/]
20:56:04,268 INFO  [AspectDeployer] Deployed AOP:
file:/home/gs145266/tools/jboss/4.0.4/Patch1/server/default/deploy/ejb3-interceptors-aop.xml
20:56:05,545 INFO  [WebService] Using RMI server codebase:
http://dhcp-uaus09-130-6:8083/
20:56:06,963 INFO  [MailService] Mail Service bound to java:/Mail
20:56:07,408 INFO  [NamingService] JNDI bootstrap JNP=/0.0.0.0:1099,
RMI=/0.0.0.0:1098, backlog=50, no client SocketFactory, Server
SocketFactory=class org.jboss.net.sockets.DefaultSocketFactory
20:56:07,422 INFO  [SubscriptionManager] Bound event dispatcher to
java:/EventDispatcher
20:56:07,865 INFO  [Embedded] Catalina naming disabled
20:56:07,915 INFO  [ClusterRuleSetFactory] Unable to find a cluster rule set in
the classpath. Will load the default rule set.
20:56:07,916 INFO  [ClusterRuleSetFactory] Unable to find a cluster rule set in
the classpath. Will load the default rule set.
20:56:08,186 INFO  [Http11BaseProtocol] Initializing Coyote HTTP/1.1 on
http-0.0.0.0-8080
20:56:08,187 INFO  [Catalina] Initialization processed in 271 ms
20:56:08,194 INFO  [StandardService] Starting service jboss.web
20:56:08,197 INFO  [StandardEngine] Starting Servlet Engine: Apache Tomcat/5.5.17
20:56:08,227 INFO  [StandardHost] XML validation disabled
20:56:08,251 INFO  [Catalina] Server startup in 57 ms
20:56:08,386 INFO  [TomcatDeployer] deploy, ctxPath=/,
warUrl=.../deploy/jbossweb-tomcat55.sar/ROOT.war/
20:56:08,685 INFO  [WebappLoader] Dual registration of jndi stream handler:
factory already defined
20:56:09,426 INFO  [TomcatDeployer] deploy, ctxPath=/jbossws,
warUrl=.../tmp/deploy/tmp34823jbossws-exp.war/
20:56:09,751 INFO  [RARDeployment] Required license terms exist, view
META-INF/ra.xml in .../deploy/jboss-local-jdbc.rar
20:56:09,840 INFO  [RARDeployment] Required license terms exist, view
META-INF/ra.xml in .../deploy/jms/jms-ra.rar
20:56:09,861 INFO  [RARDeployment] Required license terms exist, view
META-INF/ra.xml in .../deploy/quartz-ra.rar
20:56:09,869 INFO  [QuartzResourceAdapter] start quartz!!!
20:56:10,198 INFO  [SimpleThreadPool] Job execution threads will use class
loader of thread: main
20:56:10,219 INFO  [QuartzScheduler] Quartz Scheduler v.1.5.2 created.
20:56:10,221 INFO  [RAMJobStore] RAMJobStore initialized.
20:56:10,222 INFO  [StdSchedulerFactory] Quartz scheduler
'DefaultQuartzScheduler' initialized from default resource file in Quartz
package: 'quartz.properties'
20:56:10,222 INFO  [StdSchedulerFactory] Quartz scheduler version: 1.5.2
20:56:10,222 INFO  [QuartzScheduler] Scheduler
DefaultQuartzScheduler_$_NON_CLUSTERED started.
20:56:10,741 INFO  [ConnectionFactoryBindingService] Bound ConnectionManager
'jboss.jca:service=DataSourceBinding,name=DefaultDS' to JNDI name 'java:DefaultDS'
20:56:11,011 INFO  [A] Bound to JNDI name: queue/A
20:56:11,012 INFO  [B] Bound to JNDI name: queue/B
20:56:11,013 INFO  [C] Bound to JNDI name: queue/C
20:56:11,014 INFO  [D] Bound to JNDI name: queue/D
20:56:11,014 INFO  [ex] Bound to JNDI name: queue/ex
20:56:11,036 INFO  [testTopic] Bound to JNDI name: topic/testTopic
20:56:11,037 INFO  [securedTopic] Bound to JNDI name: topic/securedTopic
20:56:11,037 INFO  [testDurableTopic] Bound to JNDI name: topic/testDurableTopic
20:56:11,040 INFO  [testQueue] Bound to JNDI name: queue/testQueue
20:56:11,054 INFO  [UILServerILService] JBossMQ UIL service available at :
/0.0.0.0:8093
20:56:11,098 INFO  [DLQ] Bound to JNDI name: queue/DLQ
20:56:11,244 INFO  [ConnectionFactoryBindingService] Bound ConnectionManager
'jboss.jca:service=ConnectionFactoryBinding,name=JmsXA' to JNDI name 'java:JmsXA'
20:56:11,263 INFO  [TomcatDeployer] deploy, ctxPath=/jmx-console,
warUrl=.../deploy/jmx-console.war/
20:56:11,415 INFO  [Http11BaseProtocol] Starting Coyote HTTP/1.1 on
http-0.0.0.0-8080
20:56:11,525 INFO  [ChannelSocket] JK: ajp13 listening on /0.0.0.0:8009
20:56:11,531 INFO  [JkMain] Jk running ID=0 time=0/20  config=null
20:56:11,539 INFO  [Server] JBoss (MX MicroKernel) [4.0.4.GA (build:
CVSTag=JBoss_4_0_4_GA date=200605151000)] Started in 11s:759ms

JBoss log files are attached.