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The screen displayed by updater.jar when it is updating something between restarts of the IDE should not have a border on it, at least when on an OS that supports borderless windows. Please copy implementation from org.netbeans.core.Splash for this purpose.
Automated change of version from Other to Dev.
Version: 'Dev' -> 3.2
Target milestone -> 3.3
Reassign to proper address.
Fixed in main trunk.
Verified. Moreover it is possible to modify the splash border now - see #21624.
Resolved for 3.3.x or earlier, no new info since then -> closing.