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The main problem was described in the issue 47775.
I will take care of it.
It looks that /cvs/ide/launcher/upgrade/src/org/netbeans/upgrade/copy4.0beta2 does not list Services/org-netbeans-modules-java-SourceOptions.settings so the upgrade from beta does not work. This must be P2 since we want this to integrate to nb 4.0
.settings file added. Jardo, could you review the diff please? http://www.netbeans.org/source/browse/ide/launcher/upgrade/src/org/netbeans/upgrade/copy4.0beta2.diff?r1=1.4&r2=1.5&f=u
Will not hurt anything and is likely to improve something.
fixed in release40 /cvs/ide/launcher/upgrade/src/org/netbeans/upgrade/copy4.0beta2 new revision: 1.4.4.1; previous revision: 1.4
verified