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Currently there is public API for obtaining and generation JMS message destinations in the server which is part of the Java EE Server Registry. On the other hand with ee7 comes new concept of generation using annotation on the project's java beans. These two concepts should be consolidated under one shared SPI with implementations in the Java EE Server Registry and somewhere else, maybe JavaEE Resources.
To late for fixing that into nb74 - there can be many changes and regressions. I'll take a look into nb80.
Targeting as enhancement for next releases.
This old bug may not be relevant anymore. If you can still reproduce it in 8.2 development builds please reopen this issue. Thanks for your cooperation, NetBeans IDE 8.2 Release Boss