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If one resolves conflicts in a file and then closes the window it WON'T ask the user if he wants to save the changes. Honestly the whole workflow with the "OK" and "Cancel" button at the bottom of the page is weird. I'd expect it to be consistent with the common editor window - when user resolves at least one conflict, then the window gets "modified" status and Save action is enabled. Then when the file is closed with the modified status the common "save changes" dialog would appear.
org.netbeans.modules.merge.builtin.visualizer.MergeDialogComponent
fix: http://hg.netbeans.org/core-main/rev/1272c47d1e1b
Integrated into 'main-golden', will be available in build *201204050400* on http://bits.netbeans.org/dev/nightly/ (upload may still be in progress) Changeset: http://hg.netbeans.org/main-golden/rev/1272c47d1e1b User: Ondrej Vrabec <ovrabec@netbeans.org> Log: #210680 - Merge Conflict Resolver won't ask if you want to save the changes