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Profiling an application with the Netbeans 6.7 profiler does not work. A lot of exceptions are thrown: Profiler Agent: Initializing... Profiler Agent: Options: >/usr/local/java/netbeans-6.7beta/profiler3/lib,5140,10< Profiler Agent: Initialized succesfully Profiler Agent: Waiting for connection on port 5140, timeout 10 seconds (Protocol version: 9) Profiler Agent: Established local connection with the tool Profiler Agent: Redefining 100 classes at idx 0, out of total 642 Profiler Agent: Redefining 100 classes at idx 100, out of total 642 Profiler Agent: Redefining 100 classes at idx 200, out of total 642 Profiler Agent: Redefining 100 classes at idx 300, out of total 642 Profiler Agent: Redefining 100 classes at idx 400, out of total 642 Profiler Agent: Redefining 100 classes at idx 500, out of total 642 Profiler Agent: Redefining 42 classes at idx 600, out of total 642 ------------------------------------------------------------------------------- >Log Session: Tuesday, May 5, 2009 4:00:42 PM CEST >System Info: Product Version = ParaVision 200904242137 Operating System = Linux version 2.6.25.20-0.1-pae running on i386 Java; VM; Vendor = 1.6.0_13; Java HotSpot(TM) Server VM 11.3-b02; Sun Microsystems Inc. Runtime = Java(TM) SE Runtime Environment 1.6.0_13-b03 Java Home = /usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre System Locale; Encoding = en_US (pv6); ANSI_X3.4-1968 Home Directory = /home/xxx Current Directory = /home/xxx/pv.HEAD/gen/java/platform User Directory = /home/xxx/pv.HEAD/gen/java/platform/build/testuserdir Installation = /home/xxx/pv.HEAD/gen/java/platform/build/cluster /usr/local/java/netbeans-6.7beta/cnd2 /usr/local/java/netbeans-6.7beta/dlight1 /usr/local/java/netbeans-6.7beta/ide11 /usr/local/java/netbeans-6.7beta/platform10 /usr/local/java/netbeans-6.7beta/platform10 Boot & Ext. Classpath = /usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/endorsed/yoko-spec-corba-1.0-incubating-M2.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/endorsed/yoko-core-1.0-incubating-M2.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/endorsed/jaxb-api.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/resources.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/rt.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/sunrsasign.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/jsse.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/jce.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/charsets.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/classes:/usr/local/java/netbeans-6.7beta/profiler3/lib/jfluid-server.jar:/usr/local/java/netbeans-6.7beta/profiler3/lib/jfluid-server-15.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/dnsns.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/clibwrapper_jiio.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/annotations.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/jaxb-impl.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/sunpkcs11.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/mlibwrapper_jai.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/sunjce_provider.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/jai_codec.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/localedata.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/jai_imageio.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/ext/jai_core.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/endorsed/yoko-spec-corba-1.0-incubating-M2.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/endorsed/yoko-core-1.0-incubating-M2.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/jre/lib/endorsed/jaxb-api.jar Application Classpath = /usr/local/java/netbeans-6.7beta/platform10/lib/boot.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/org-openide-modules.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/org-openide-util.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/locale/boot_ja.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/locale/boot_pt_BR.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/locale/boot_zh_CN.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/locale/org-openide-modules_ja.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/locale/org-openide-modules_pt_BR.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/locale/org-openide-modules_zh_CN.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/locale/org-openide-util_ja.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/locale/org-openide-util_pt_BR.jar:/usr/local/java/netbeans-6.7beta/platform10/lib/locale/org-openide-util_zh_CN.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/lib/dt.jar:/usr/local/java/jdk1.6.0_13_b03_jaxb2.1.6/lib/tools.jar Startup Classpath = /usr/local/java/netbeans-6.7beta/platform10/core/core.jar:/usr/local/java/netbeans-6.7beta/platform10/core/org-openide-filesystems.jar:/usr/local/java/netbeans-6.7beta/platform10/core/locale/core_pt_BR.jar:/usr/local/java/netbeans-6.7beta/platform10/core/locale/org-openide-filesystems_zh_CN.jar:/usr/local/java/netbeans-6.7beta/platform10/core/locale/core_zh_CN.jar:/usr/local/java/netbeans-6.7beta/platform10/core/locale/org-openide-filesystems_ja.jar:/usr/local/java/netbeans-6.7beta/platform10/core/locale/org-openide-filesystems_pt_BR.jar:/usr/local/java/netbeans-6.7beta/platform10/core/locale/core_ja.jar:/home/xxx/pv.HEAD/gen/java/platform/build/cluster/core/locale/core_pv6.jar ------------------------------------------------------------------------------- Profiler Agent: 250 classes cached. Profiler Agent: 250 classes cached. Profiler Agent: 250 classes cached. Profiler Agent: 250 classes cached. Profiler Agent: 250 classes cached. INFO [org.netbeans.core.windows.persistence]: [PersistenceManager.getTopComponentForID] Problem when deserializing TopComponent for tcID:'output'. Reason: Error reading MultiFileObject@edfb95[Windows2/Components/output.settings]: java.lang.reflect.InvocationTargetException Content: <?xml version="1.0"?> <!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd"> <settings version="1.0"> <module name="org.netbeans.core.io.ui/1"/> <instanceof class="org.openide.windows.TopComponent"/> <instance class="org.netbeans.core.io.ui.IOWindow$IOWindowImpl" method="getDefault"/> </settings> Method: getDefault Class: class org.netbeans.core.io.ui.IOWindow$IOWindowImpl Content: <?xml version="1.0"?> <!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd"> <settings version="1.0"> <module name="org.netbeans.core.io.ui/1"/> <instanceof class="org.openide.windows.TopComponent"/> <instance class="org.netbeans.core.io.ui.IOWindow$IOWindowImpl" method="getDefault"/> </settings> Method: getDefault Class: class org.netbeans.core.io.ui.IOWindow$IOWindowImpl Caused: java.lang.ArrayIndexOutOfBoundsException: -32768 at org.netbeans.lib.profiler.server.ProfilerRuntimeCPUFullInstr.methodEntry(ProfilerRuntimeCPUFullInstr.java:171) at javax.swing.MenuSelectionManager.<clinit>(MenuSelectionManager.java:30) Caused: java.lang.ExceptionInInitializerError at javax.swing.plaf.basic.BasicPopupMenuUI$MouseGrabber.<init>(BasicPopupMenuUI.java:688) at javax.swing.plaf.basic.BasicPopupMenuUI.installListeners(BasicPopupMenuUI.java:109) at javax.swing.plaf.basic.BasicPopupMenuUI.installUI(BasicPopupMenuUI.java:77) at javax.swing.JComponent.setUI(JComponent.java:676) at javax.swing.JPopupMenu.setUI(JPopupMenu.java:202) at javax.swing.JPopupMenu.updateUI(JPopupMenu.java:211) at javax.swing.JPopupMenu.<init>(JPopupMenu.java:176) at javax.swing.JPopupMenu.<init>(JPopupMenu.java:160) at org.netbeans.core.io.ui.IOWindow$IOWindowImpl.<init>(IOWindow.java:244) at org.netbeans.core.io.ui.IOWindow$IOWindowImpl.getDefault(IOWindow.java:186) Caused: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:672) Caused: java.io.IOException: Error reading MultiFileObject@edfb95[Windows2/Components/output.settings] at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:682) at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.instanceCreate(XMLSettingsSupport.java:584) at org.netbeans.modules.settings.convertors.SerialDataConvertor$SettingsInstance.instanceCreate(SerialDataConvertor.java:425) [catch] at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentPersistentForID(PersistenceManager.java:532) at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentForID(PersistenceManager.java:642) at org.netbeans.core.windows.PersistenceHandler.getTopComponentForID(PersistenceHandler.java:462) at org.netbeans.core.windows.WindowManagerImpl.getTopComponentForID(WindowManagerImpl.java:813) at org.netbeans.core.windows.WindowManagerImpl.findTopComponent(WindowManagerImpl.java:252) at org.netbeans.core.io.ui.IOWindow$IOWindowImpl.findDefault(IOWindow.java:158) at org.netbeans.core.io.ui.IOWindow.impl(IOWindow.java:95) at org.netbeans.core.io.ui.IOWindow.add(IOWindow.java:100) at org.openide.windows.IOContainer.add(IOContainer.java:151) at org.netbeans.core.output2.Controller.createOutputTab(Controller.java:114) at org.netbeans.core.output2.Controller.performCommand(Controller.java:353) at org.netbeans.core.output2.Controller.eventDispatched(Controller.java:99) at org.netbeans.core.output2.IOEvent.dispatch(IOEvent.java:272) at org.netbeans.core.output2.NbIO.post(NbIO.java:243) at org.netbeans.core.output2.NbIOProvider.getIO(NbIOProvider.java:121) at org.netbeans.core.output2.NbIOProvider.getIO(NbIOProvider.java:92) at de.bruker.mri.infra.program.ProgramImpl$InputOutputSetupRunnable.run(ProgramImpl.java:510) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:212) at java.awt.EventQueue.dispatchEvent(EventQueue.java:598) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:271) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:185) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:175) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:170) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:162) at java.awt.EventDispatchThread.run(EventDispatchThread.java:136) Content: <?xml version="1.0"?> <!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd"> <settings version="1.0"> <module name="org.netbeans.core.io.ui/1"/> <instanceof class="org.openide.windows.TopComponent"/> <instance class="org.netbeans.core.io.ui.IOWindow$IOWindowImpl" method="getDefault"/> </settings> ALL [null]: Method: getDefault ALL [null]: Class: class org.netbeans.core.io.ui.IOWindow$IOWindowImpl SEVERE [org.netbeans.core.modules] java.lang.ArrayIndexOutOfBoundsException SEVERE [global] java.lang.NoClassDefFoundError: Could not initialize class javax.swing.MenuSelectionManager at javax.swing.plaf.basic.BasicPopupMenuUI$MouseGrabber.<init>(BasicPopupMenuUI.java:688) at javax.swing.plaf.basic.BasicPopupMenuUI.installListeners(BasicPopupMenuUI.java:109) at javax.swing.plaf.basic.BasicPopupMenuUI.installUI(BasicPopupMenuUI.java:77) at javax.swing.JComponent.setUI(JComponent.java:676) at javax.swing.JPopupMenu.setUI(JPopupMenu.java:202) at javax.swing.JPopupMenu.updateUI(JPopupMenu.java:211) at javax.swing.JPopupMenu.<init>(JPopupMenu.java:176) at javax.swing.JPopupMenu.<init>(JPopupMenu.java:160) at org.netbeans.core.io.ui.IOWindow$IOWindowImpl.<init>(IOWindow.java:244) at org.netbeans.core.io.ui.IOWindow$IOWindowImpl.getDefault(IOWindow.java:186) at org.netbeans.core.io.ui.IOWindow$IOWindowImpl.findDefault(IOWindow.java:175) at org.netbeans.core.io.ui.IOWindow.impl(IOWindow.java:95) at org.netbeans.core.io.ui.IOWindow.add(IOWindow.java:100) at org.openide.windows.IOContainer.add(IOContainer.java:151) at org.netbeans.core.output2.Controller.createOutputTab(Controller.java:114) at org.netbeans.core.output2.Controller.performCommand(Controller.java:353) at org.netbeans.core.output2.Controller.eventDispatched(Controller.java:99) at org.netbeans.core.output2.IOEvent.dispatch(IOEvent.java:272) at org.netbeans.core.output2.NbIO.post(NbIO.java:243) at org.netbeans.core.output2.NbIOProvider.getIO(NbIOProvider.java:121) at org.netbeans.core.output2.NbIOProvider.getIO(NbIOProvider.java:92) at de.bruker.mri.infra.program.ProgramImpl$InputOutputSetupRunnable.run(ProgramImpl.java:510) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:212) at java.awt.EventQueue.dispatchEvent(EventQueue.java:598) [catch] at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:271) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:185) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:175) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:170) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:162) at java.awt.EventDispatchThread.run(EventDispatchThread.java:136) INFO [cnd.execution.logger]: chmod failed: [/bin/chmod, 755, /usr/local/java/netbeans-6.7beta/cnd2/bin/dorun.sh, /usr/local/java/netbeans-6.7beta/cnd2/bin/unbuffer-Linux-x86.so, /usr/local/java/netbeans-6.7beta/cnd2/bin/unbuffer-Linux-x86_64.so] Profiler Agent: 250 classes cached. WARNING: LibraryDeclarationHandlerImpl: Cannot create library: jaxb of unknown type: j2se INFO [org.netbeans.core.startup.NbEvents]: Turning on modules: org.openide.util [7.22.1.1 1 200904242137] org.openide.modules [7.10.1 200904242137] org.openide.awt [7.7.1.1 200904242137] org.jdesktop.layout/1 [1.7.1.103 103 200904242137] org.netbeans.api.progress/1 [1.13.1.1 1 200904242137] org.openide.dialogs [7.10.1 200904242137] org.netbeans.swing.outline [1.4.1 200904242137] org.openide.nodes [7.9.1.1 200904242137] org.openide.explorer [6.18.1.1 1 200904242137] org.openide.windows [6.26.1 200904242137] org.openide.filesystems [7.21.1.1.1 1 200904242137] org.netbeans.modules.editor.mimelookup/1 [1.11.1 200904242137] org.openide.text [6.22.1 200904242137] org.openide.actions [6.9.1.1 200904242137] org.incava.util.diff [1.0 090505] org.netbeans.libs.junit4 [1.4.1 200904242137] javax.vecmath [1.0 090505] de.bruker.mri.lib [1.0 090505] att.grappa [1.0 090505] com.lowagie.text [1.0 090505] org.netbeans.bootstrap/1 [2.18.1 200904242137] org.netbeans.core.startup/1 [1.15.1.1 200904242137] org.netbeans.spi.quicksearch [1.1.1 200904242137] org.netbeans.modules.queries/1 [1.14.1 200904242137] org.openide.loaders [7.5.1 200904242137] org.openide.io [1.16.1 200904242137] org.netbeans.swing.plaf [1.9.1 200904242137] org.netbeans.core/2 [3.11.1.1 200904242137] org.netbeans.modules.options.api/1 [1.12.1 200904242137] org.netbeans.swing.tabcontrol [1.15.1 200904242137] org.h2 [1.0 090505] org.hibernate [1.0 090505] com.thoughtworks.xstream [1.0 090505] de.bruker.mri.entities [1.0 090505] org.apache.batik.anim [1.0 090505] com.sun.media.customizer [1.0 090505] de.bruker.mri.serviceprovider [1.0 090505] de.bruker.mri.infra [1.0 090505] org.netbeans.modules.editor.util/1 [1.28.1 200904242137] org.netbeans.modules.lexer/2 [1.30.1.1 1 200904242137] org.netbeans.modules.editor.settings/1 [1.24.1 200904242137] org.netbeans.modules.editor.lib2/1 [1.10.1.2 2 200904242137] org.netbeans.modules.editor.fold/1 [1.10.1 200904242137] org.netbeans.modules.editor.lib/1 [1.37.1.8.2 8 200904242137] org.netbeans.modules.editor.errorstripe.api/1 [2.6.1.1 1 200904242137] org.netbeans.modules.editor.errorstripe/2 [2.6.1.1.1 1 200904242137] org.netbeans.modules.projectapi/1 [1.24.1 200904242137] org.netbeans.modules.javahelp/1 [2.12.1 200904242137] org.netbeans.modules.projectuiapi/1 [1.34.1.6 6 200904242137] org.openidex.util/3 [3.20.1 200904242137] org.netbeans.modules.editor.indent/2 [1.12.1.8 200904242137] org.netbeans.modules.editor/3 [1.42.1.3.8.2 3 200904242137] org.netbeans.modules.options.keymap [1.5.1 200904242137] org.netbeans.modules.editor.settings.storage/1 [1.19.1 200904242137] org.netbeans.modules.options.editor/1 [1.12.1 200904242137] org.netbeans.modules.diff/1 [1.21.1.42.1 42 200904242137] de.bruker.mri.parx [1.0 090505] de.bruker.mri.acquisition [1.0 090505] de.bruker.mri.paramcard [1.0 090505] de.bruker.mri.visu [1.0 090505] de.bruker.mri.vip [1.0 090505] de.bruker.mri.viscomps [1.0 090505] de.bruker.mri.diagrams [1.0 090505] de.bruker.mri.viewer [1.0 090505] de.bruker.mri.viewer2d [1.0 090505] de.bruker.mri.geoeditor [1.0 090505] de.bruker.mri.slideshow [1.0 090505] com.jgoodies.forms.util [1.0 090505] de.bruker.mri.dsetserver [1.0 090505] de.bruker.mri.examcard [1.0 090505] com.toedter.plaf [1.0 090505] de.bruker.mri.dsetexplorer [1.0 090505] org.netbeans.modules.xml.xam/1 [1.5.1.1 1 200904242137] org.netbeans.libs.lucene/1 [2.5.1.232 232 200904242137] org.openide.execution [1.13.1 200904242137] org.netbeans.api.java.classpath/1 [1.19.1 200904242137] org.netbeans.modules.parsing.api [1.12.1.1 1 200904242137] org.netbeans.modules.editor.completion/1 [1.14.1.1 1 200904242137] org.netbeans.spi.editor.hints/0 [1.7.1.7.2 7 200904242137] org.netbeans.modules.editor.codetemplates/1 [1.11.1.1 1 200904242137] org.netbeans.core.ui/1 [1.14.1.1 200904242137] org.netbeans.modules.jumpto/1 [1.8.1 200904242137] org.netbeans.api.annotations.common/1 [1.0.1 200904242137] org.netbeans.modules.editor.guards/1 [1.3.1 200904242137] org.netbeans.modules.refactoring.api [1.5.1 200904242137] org.netbeans.spi.tasklist/1 [1.4.1.1 1 200904242137] org.netbeans.spi.navigator/1 [1.8.1 200904242137] org.netbeans.modules.csl.api/1 [1.9.1.1.1.1.1 1 200904242137] org.netbeans.modules.html.lexer/1 [1.4.1 200904242137] org.netbeans.modules.editor.bracesmatching/0 [1.7.1 200904242137] org.netbeans.modules.css.editor/1 [1.3.1 200904242137] org.netbeans.modules.editor.structure/1 [1.18.1.1 1 200904242137] org.netbeans.modules.html.editor.lib/1 [1.9.1 200904242137] org.netbeans.modules.html.editor/1 [1.12.1 200904242137] org.netbeans.libs.jsch/1 [1.8.1.139 0139 200904242137] org.netbeans.modules.cnd.api.project/1 [1.5.1 200904242137] org.netbeans.modules.cnd.utils [1.2.1.1 1 200904242137] org.netbeans.modules.extexecution/2 [1.14.1 200904242137] org.netbeans.modules.dlight.nativeexecution [1.0.1 200904242137] org.netbeans.modules.cnd.api.remote/1 [1.0.1 200904242137] org.netbeans.modules.cnd.lexer/1 [1.2.1 200904242137] org.netbeans.modules.cnd.dwarfdump [1.5.1 200904242137] org.netbeans.modules.cnd/1 [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.api.model/1 [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.repository.api/1 [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.antlr [2.10.1 200904242137] org.netbeans.modules.cnd.apt [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.editor/1 [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.modelutil/1 [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.model.services/1 [1.5.1.1 1 200904242137] org.netbeans.api.xml/1 [1.17.1 200904242137] org.apache.xml.resolver [1.6.1.12 12 200904242137] org.netbeans.modules.xml.catalog/2 [1.15.1.4 4 200904242137] org.netbeans.modules.project.libraries/1 [1.20.1 200904242137] org.netbeans.modules.project.ant/1 [1.31.1 200904242137] org.netbeans.modules.cnd.modelimpl/1 [1.5.1.1 1 200904242137] org.netbeans.modules.asm/1 [1.2.1.1 200904242137] org.netbeans.modules.cnd.makeproject/1 [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.discovery [1.5.1 200904242137] org.netbeans.modules.cnd.modeldiscovery [1.5.1 200904242137] org.netbeans.modules.dlight.util [1.0.1 200904242137] org.netbeans.modules.dlight [1.1.1.1 1 200904242137] org.netbeans.modules.dlight.spi [1.0.1 200904242137] org.netbeans.modules.cnd.gizmo [1.0.1 200904242137] org.netbeans.modules.cnd.modelui [1.5.1 200904242137] de.bruker.mri.viewer1d [1.0 090505] de.bruker.mri.recoviewer1d [1.0 090505] org.netbeans.modules.dlight.core.stack [1.1.1.1.1 1 200904242137] org.netbeans.spi.viewmodel/2 [1.17.1 200904242137] org.netbeans.modules.dlight.management [1.1.1.1.1 1 200904242137] org.netbeans.modules.dlight.visualizers [1.1.1.1.1 1 200904242137] org.netbeans.core.execution/1 [1.13.1.1 200904242137] org.netbeans.modules.masterfs/2 [2.16.1 200904242137] org.netbeans.modules.favorites/1 [1.15.1 200904242137] org.netbeans.modules.projectui [1.16.1.1.6 1 200904242137] org.netbeans.modules.projectui.buildmenu/1 [1.1.1.1 1 200904242137] de.bruker.mri.platformconfig [1.0 090505] org.netbeans.modules.dlight.perfan [1.1.1.1.1 1 200904242137] org.netbeans.modules.dlight.dtrace [1.1.1.1.1.1 1 200904242137] org.netbeans.modules.dlight.indicators [1.0.1 200904242137] org.netbeans.modules.dlight.tools [1.1.1.1.1 1 200904242137] org.netbeans.modules.dlight.collector.stdout [1.1.1.1.1 1 200904242137] org.netbeans.modules.dlight.sync [1.0.1 200904242137] org.netbeans.modules.cnd.dwarfdiscovery [1.5.1 200904242137] org.netbeans.modules.schema2beans/1 [1.19.1 200904242137] org.netbeans.modules.editor.macros/0 [1.3.1.1.8 1 200904242137] org.netbeans.swing.dirchooser [1.3.1 200904242137] org.netbeans.modules.editor.bookmarks/1 [1.7.1 200904242137] org.netbeans.libs.xerces/1 [1.13.1.280 280 200904242137] org.mozilla.rhino.patched/1 [1.104.1 200904242137] org.netbeans.modules.javascript.editing/1 [0.87.1 200904242137] org.netbeans.modules.javascript.refactoring/1 [0.62.1 200904242137] org.netbeans.modules.javascript.hints/1 [0.37.1 200904242137] org.netbeans.modules.javascript.kit/1 [0.105.1 200904242137] org.netbeans.modules.xml.core/2 [1.16.1.4 4 200904242137] org.netbeans.modules.xml.lexer [1.4.1 200904242137] org.netbeans.modules.xml.text/2 [1.17.1.5 5 200904242137] org.netbeans.modules.xml.schema.model/1 [1.5.1.1 1 200904242137] org.netbeans.modules.xml.axi [1.5.1 200904242137] org.netbeans.modules.xml.xdm/1 [1.5.1.1 1 200904242137] org.netbeans.modules.xml.retriever/1 [1.4.1 200904242137] org.netbeans.modules.xml [1.3.1 200904242137] org.netbeans.modules.xml.tax/2 [1.17.1.280 200904242137] org.netbeans.modules.xml.tools/2 [1.17.1 200904242137] org.netbeans.modules.xml.schema.completion [1.3.1 200904242137] org.netbeans.modules.properties/1 [1.27.1 200904242137] org.netbeans.core.output2/1 [1.11.1.1 1 200904242137] org.netbeans.modules.editor.plain.lib/1 [1.7.1 200904242137] org.netbeans.modules.web.flyingsaucer/1 [1.3.1.1 1 200904242137] org.netbeans.modules.css.visual/1 [2.4.1 200904242137] org.netbeans.modules.servletapi/1 [1.14.1 200904242137] org.netbeans.modules.httpserver/2 [2.10.1.42 42 200904242137] org.netbeans.modules.xsl/1 [1.17.1 200904242137] org.netbeans.modules.languages.manifest [1.6.1 200904242137] org.netbeans.libs.jsr223/1 [1.9.1.6 6 200904242137] org.netbeans.modules.templates [1.4.1 200904242137] org.netbeans.modules.languages.diff [1.7.1 200904242137] org.netbeans.modules.image/1 [1.22.1 200904242137] org.netbeans.spi.palette/1 [1.15.1 200904242137] org.netbeans.modules.html/1 [1.25.1 200904242137] org.netbeans.modules.editor.kit [1.3.1 200904242137] org.netbeans.modules.sendopts/2 [2.4.1 200904242137] org.netbeans.modules.utilities/1 [1.30.1 200904242137] org.netbeans.modules.tasklist.ui/1 [1.3.1.1 200904242137] org.netbeans.modules.tasklist.todo/1 [1.4.1.1 1 200904242137] org.netbeans.modules.tasklist.projectint/1 [1.3.1 200904242137] org.netbeans.modules.tasklist.kit [1.3.1 200904242137] org.netbeans.modules.usersguide/1 [1.23.1 200904242137] org.netbeans.modules.print.editor [7.0.1 200904242137] org.netbeans.modules.editor.plain/2 [1.8.1 200904242137] org.netbeans.modules.autoupdate.services [1.8.1 200904242137] org.netbeans.modules.autoupdate.ui [1.7.1 200904242137] org.netbeans.modules.print [7.0.1 200904242137] org.netbeans.modules.settings/1 [1.18.1.1 200904242137] org.netbeans.core.windows/2 [2.14.1.1 200904242137] org.netbeans.modules.core.kit [1.3.1 200904242137] org.netbeans.core.ide/1 [1.15.1 200904242137] org.netbeans.modules.extbrowser/1 [1.14.1 200904242137] org.netbeans.modules.defaults/1 [1.6.1 200904242137] org.netbeans.modules.ide.kit [1.6.1 200904242137] de.bruker.mri.preference [1.0 090505] org.netbeans.api.debugger/1 [1.17.1 200904242137] de.bruker.mri.compat [1.0 090505] de.bruker.mri.jmacromanager [1.0 090505] org.netbeans.api.visual [2.18.1 200904242137] org.netbeans.libs.jna/1 [1.2.1 200904242137] org.netbeans.modules.dlight.cpu [1.0.1 200904242137] de.bruker.mri.pictureviewer2d [1.0 090505] org.netbeans.modules.cnd.refactoring/1 [1.3.1.1 1 200904242137] org.netbeans.modules.cnd.qnavigator/1 [1.5.1 200904242137] de.bruker.mri.dicom [1.0 090505] org.netbeans.core.nativeaccess/1 [1.2.1 200904242137] de.bruker.mri.viewingcard [1.0 090505] org.netbeans.libs.freemarker/1 [2.6.1.238 238 200904242137] org.netbeans.modules.editor.mimelookup.impl/1 [1.4.1 200904242137] de.bruker.mri.reco [1.0 090505] de.bruker.mri.scanprogramviewer [1.0 090505] org.netbeans.modules.dlight.core.ui [1.0.1 200904242137] org.netbeans.modules.progress.ui [1.3.1.1 200904242137] org.netbeans.libs.swingx/1 [1.1.1 200904242137] org.netbeans.libs.jaxb/1 [1.4.1 200904242137] org.netbeans.modules.xml.wsdl.model/1 [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.remote [1.1.1.1 1 200904242137] org.netbeans.modules.dlight.db.h2 [1.1.1.1.1 1 200904242137] org.netbeans.modules.cnd.repository [1.5.1 200904242137] de.bruker.mri.acqviewer1d [1.0 090505] org.netbeans.modules.cnd.classview/1 [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.gotodeclaration [1.5.1 200904242137] de.bruker.mri.recoviewer2d [1.0 090505] de.bruker.mri.uidefaultsviewer [1.0 090505] org.netbeans.modules.lexer.nbbridge/1 [1.5.1.1 200904242137] de.bruker.mri.dsetbrowser [1.0 090505] org.netbeans.modules.cnd.callgraph [1.1.1 200904242137] de.bruker.mri.topspin [1.0 090505] org.netbeans.modules.dlight.memory [1.0.1 200904242137] org.netbeans.modules.cnd.highlight [1.6.1.1 200904242137] org.netbeans.modules.cnd.completion/1 [1.5.1.1 1 200904242137] org.netbeans.modules.dlight.derby.support [1.1.1.1.1 1 200904242137] org.netbeans.modules.dlight.kit [1.0.1 200904242137] org.netbeans.spi.debugger.ui/1 [2.16.1 200904242137] org.netbeans.modules.cnd.debugger.gdb/1 [1.5.1.2 2 200904242137] org.netbeans.modules.cnd.navigation [1.5.1 200904242137] org.netbeans.modules.cnd.folding [1.5.1.1 1 200904242137] org.netbeans.modules.cnd.kit [1.5.1 200904242137] org.netbeans.modules.properties.syntax/1 [1.21.1 200904242137] de.bruker.mri.pulseprogram [1.0 090505] de.bruker.mri.jive [1.0 090505] de.bruker.mri.exportservices [1.0 090505] de.bruker.mri.method [1.0 090505] org.netbeans.core.io.ui/1 [1.1.1.1 1 200904242137] Profiler Agent: 250 classes cached. INFO [org.openide.loaders.FolderInstance.Toolbars.Acquisition]: Cannot create org.openide.loaders.FolderInstance$HoldInstance@82fd0f[Toolbars/Acquisition/de-bruker-mri-acquisition-StopAcquisitionAction.shadow] java.lang.ArrayIndexOutOfBoundsException Caused: java.lang.ClassNotFoundException: Cannot instantiate de.bruker.mri.acquisition.StopAcquisitionAction for MultiFileObject@1daa156[Actions/Acquisition/de-bruker-mri-acquisition-StopAcquisitionAction.instance] at org.openide.loaders.InstanceSupport.instanceCreate(InstanceSupport.java:230) at org.openide.loaders.InstanceDataObject$Ser.instanceCreate(InstanceDataObject.java:1303) at org.openide.loaders.InstanceDataObject.instanceCreate(InstanceDataObject.java:760) at org.openide.loaders.FolderInstance.instanceForCookie(FolderInstance.java:572) at org.openide.awt.Toolbar$Folder.instanceForCookie(Toolbar.java:361) at org.openide.loaders.FolderInstance$HoldInstance.instanceCreate(FolderInstance.java:1122) [catch] at org.openide.loaders.FolderInstance$1R.instances(FolderInstance.java:693) at org.openide.loaders.FolderInstance$1R.run(FolderInstance.java:719) at org.openide.util.RequestProcessor$Task.run(RequestProcessor.java:575) at org.openide.util.RequestProcessor$Processor.doEvaluate(RequestProcessor.java:1053) at org.openide.util.RequestProcessor$Task.waitFinished(RequestProcessor.java:740) at org.openide.loaders.FolderInstance$1R.waitFinished(FolderInstance.java:730) at org.openide.loaders.FolderInstance.waitFinished(FolderInstance.java:351) at org.openide.loaders.FolderInstance.instanceCreate(FolderInstance.java:284) at org.openide.loaders.FolderInstance.instanceForCookie(FolderInstance.java:572) at org.openide.loaders.FolderInstance$HoldInstance.instanceCreate(FolderInstance.java:1122) at org.openide.loaders.FolderInstance$1R.instances(FolderInstance.java:693) at org.openide.loaders.FolderInstance$1R.run(FolderInstance.java:719) at org.openide.util.RequestProcessor$Task.run(RequestProcessor.java:575) at org.openide.util.RequestProcessor$Processor.run(RequestProcessor.java:1008) Profiler Agent: 250 classes cached. WARNING [org.openide.filesystems.Ordering]: Not all children in Windows2/Modes/explorer/ marked with the position attribute: [DSetExplorerTopComponent.wstcref], but some are: [projectTabLogical_tc.wstcref, projectTab_tc.wstcref, favorites.wstcref, classview.wstcref, services.wstcref, DLightToolsTopComponent.wstcref] WARNING [org.openide.filesystems.Ordering]: Not all children in Windows2/Modes/output/ marked with the position attribute: [SlideShowTopComponent.wstcref], but some are: [watchesView.wstcref, localsView.wstcref, resultsView.wstcref, callstackView.wstcref, breakpointsView.wstcref, sources.wstcref, sessionsView.wstcref, threadsView.wstcref, RegistersTopComponent.wstcref, MemoryViewTopComponent.wstcref, AutosTopComponent.wstcref, MacroExpansionTopComponent.wstcref, search-results.wstcref, refactoring-preview.wstcref, find-usages.wstcref, CallGraphTopComponent.wstcref, StyleBuilderTC.wstcref, output.wstcref, TaskListTopComponent.wstcref, VisualizerTopComponentTopComponent.wstcref] INFO [org.netbeans.core.windows.persistence]: [PersistenceManager.getTopComponentForID] Problem when deserializing TopComponent for tcID:'AcqRecoViewerTopComponent'. Reason: Error reading MultiFileObject@7a84e1 [Windows2Local/Components/AcqRecoViewerTopComponent.settings]: java.lang.reflect.InvocationTargetException Content: <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd"> <settings version="1.0"> <module name="de.bruker.mri.viewer" spec="1.0"/> <instanceof class="org.openide.windows.TopComponent"/> <instanceof class="de.bruker.mri.viewer.AcqRecoViewerTopComponent"/> <instance class="de.bruker.mri.viewer.AcqRecoViewerTopComponent" method="getDefault"/> </settings> Method: getDefault Class: class de.bruker.mri.viewer.AcqRecoViewerTopComponent Content: <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd"> <settings version="1.0"> <module name="de.bruker.mri.viewer" spec="1.0"/> <instanceof class="org.openide.windows.TopComponent"/> <instanceof class="de.bruker.mri.viewer.AcqRecoViewerTopComponent"/> <instance class="de.bruker.mri.viewer.AcqRecoViewerTopComponent" method="getDefault"/> </settings> Method: getDefault Class: class de.bruker.mri.viewer.AcqRecoViewerTopComponent Caused: java.lang.ArrayIndexOutOfBoundsException: -23332 at org.netbeans.lib.profiler.server.ProfilerRuntimeCPUFullInstr.rootMethodEntry(ProfilerRuntimeCPUFullInstr.java:288) at de.bruker.mri.viewer.AcqRecoViewerTopComponent.getDefault(AcqRecoViewerTopComponent.java:63) Caused: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:672) Caused: java.io.IOException: Error reading MultiFileObject@7a84e1 [Windows2Local/Components/AcqRecoViewerTopComponent.settings] at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:682) at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.instanceCreate(XMLSettingsSupport.java:584) at org.netbeans.modules.settings.convertors.SerialDataConvertor$SettingsInstance.instanceCreate(SerialDataConvertor.java:425) [catch] at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentPersistentForID(PersistenceManager.java:532) at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentForID(PersistenceManager.java:642) at org.netbeans.core.windows.PersistenceHandler.getTopComponentForID(PersistenceHandler.java:462) at org.netbeans.core.windows.WindowManagerImpl.getTopComponentForID(WindowManagerImpl.java:813) at org.netbeans.core.windows.model.TopComponentSubModel.getTopComponent(TopComponentSubModel.java:361) at org.netbeans.core.windows.model.TopComponentSubModel.getTopComponents(TopComponentSubModel.java:87) at org.netbeans.core.windows.model.DefaultModeModel.getTopComponents(DefaultModeModel.java:268) at org.netbeans.core.windows.model.DefaultModel.getModeTopComponents(DefaultModel.java:839) at org.netbeans.core.windows.Central.getModeTopComponents(Central.java:1503) at org.netbeans.core.windows.ModeImpl.getTopComponents(ModeImpl.java:186) at org.netbeans.core.windows.model.ModesSubModel.getSlideInSizes(ModesSubModel.java:264) at org.netbeans.core.windows.model.ModesSubModel.createSlidingModeSnapshots(ModesSubModel.java:387) at org.netbeans.core.windows.model.DefaultModel.createModeStructureSnapshot(DefaultModel.java:1222) at org.netbeans.core.windows.model.DefaultModel.createWindowSystemSnapshot(DefaultModel.java:1194) at org.netbeans.core.windows.Central.createWindowSystemSnapshot(Central.java:1839) at org.netbeans.core.windows.ViewRequestor.processVisibilityRequest(ViewRequestor.java:252) at org.netbeans.core.windows.ViewRequestor.postVisibilityRequest(ViewRequestor.java:197) at org.netbeans.core.windows.ViewRequestor.scheduleRequest(ViewRequestor.java:121) at org.netbeans.core.windows.Central.setVisible(Central.java:121) at org.netbeans.core.windows.WindowManagerImpl.setVisible(WindowManagerImpl.java:790) at org.netbeans.core.windows.WindowSystemImpl.show(WindowSystemImpl.java:96) at org.netbeans.core.NonGui$2.run(NonGui.java:191) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:212) at java.awt.EventQueue.dispatchEvent(EventQueue.java:598) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:107) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:271) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:185) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:175) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:170) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:162) at java.awt.EventDispatchThread.run(EventDispatchThread.java:136) Content: <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE settings PUBLIC "-//NetBeans//DTD Session settings 1.0//EN" "http://www.netbeans.org/dtds/sessionsettings-1_0.dtd"> <settings version="1.0"> <module name="de.bruker.mri.viewer" spec="1.0"/> <instanceof class="org.openide.windows.TopComponent"/> <instanceof class="de.bruker.mri.viewer.AcqRecoViewerTopComponent"/> <instance class="de.bruker.mri.viewer.AcqRecoViewerTopComponent" method="getDefault"/> </settings> ALL [null]: Method: getDefault ALL [null]: Class: class de.bruker.mri.viewer.AcqRecoViewerTopComponent Profiler Agent: 250 classes cached. SEVERE [global] java.lang.NoClassDefFoundError: Could not initialize class javax.swing.MenuSelectionManager at org.netbeans.core.windows.view.ui.MainWindow.initializeComponents(MainWindow.java:233) at org.netbeans.core.windows.view.DefaultView.showWindowSystem(DefaultView.java:521) at org.netbeans.core.windows.view.DefaultView.windowSystemVisibilityChanged(DefaultView.java:500) at org.netbeans.core.windows.view.DefaultView.changeGUI(DefaultView.java:168) at org.netbeans.core.windows.ViewRequestor.dispatchRequest(ViewRequestor.java:271) at org.netbeans.core.windows.ViewRequestor.processVisibilityRequest(ViewRequestor.java:264) at org.netbeans.core.windows.ViewRequestor.postVisibilityRequest(ViewRequestor.java:197) at org.netbeans.core.windows.ViewRequestor.scheduleRequest(ViewRequestor.java:121) at org.netbeans.core.windows.Central.setVisible(Central.java:121) at org.netbeans.core.windows.WindowManagerImpl.setVisible(WindowManagerImpl.java:790) at org.netbeans.core.windows.WindowSystemImpl.show(WindowSystemImpl.java:96) at org.netbeans.core.NonGui$2.run(NonGui.java:191) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:212) at java.awt.EventQueue.dispatchEvent(EventQueue.java:598) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:107) [catch] at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:271) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:185) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:175) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:170) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:162) at java.awt.EventDispatchThread.run(EventDispatchThread.java:136)
See duplicate issue for workaround. *** This issue has been marked as a duplicate of 164250 ***