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[200110020100] Let's have Test.class, which has inner class Test$1.class. In Explorer is visible only Test node (it is correct). Perform copy/paste: only Test.class is copy-ed. If Cut/Paste action is performed, Test$1.class is lost!
fixed in trunk
[200110050100] Verified
Resolved for 3.3.x or earlier, no new info since then -> closing.