Steps to reproduce:

- Create a JavaFX Script project
--------------------------------------------
import javafx.stage.Stage;
import javafx.scene.Scene;

Stage {
    title : "MyApp"
    width: 200
    height: 200
    scene: Scene {
        content: [  ]
    }
}
------------------------------------
- Run the project

init:
deps-jar:
Unknown argument: 

JavaFX Packager arguments:
---------------------------
-src | -sourcepath <source root1>[;<source root2>...]          at least 1 source root is required
-cp | -classpath | -librarypath <library1>[;<library2>...]     optional
-res | -resourcepath <resource root1>[;<resource root2>...]    optional
-d | -destination <target directory>                           default target directory is ./dist
-workDir <working directory>                                   optional
-v | -verbose                                                  enables verbose output
-p | -profile [DESKTOP | MOBILE | EMBEDDED]                    default profile is DESKTOP
-appName <application name>                                    default application name is application class name
-appVendor <application vendor>                                default application vendor is "user.name" Java system property
-appVersion <application version>                              default application version is 1.0
-appClass <application class>                                  mandatory argument
-appWidth <applet width>                                       default applet width is 200
-appHeight <applet height>                                     default applet height is 200
-appCodebase <application code base URL>                       default code base is empty
-keystore <keystore for signing>                               temporary self-signature is created when keystore is not specified
-keystorePassword <password>                                   mandatory when signing with specific keystore
-keyalias <alias>                                              mandatory when signing with specific keystore
-keyaliasPassword <password>                                   keystorePassword is used instead when not specified

-help                                                          prints this help screen
-version                                                       prints JavaFX Toolchain version number

sample usages:
--------------
javafxpackager -src ./mysources -appClass mypackage.MyApplication
  builds all JavaFX and Java sources according to default DESKTOP profile specification into ./dist/MyApplication.html, ./dist/MyApplication.jnlp, 
./dist/MyApplication.jar and ./dist/MyApplication.jar.pack.gz

javafxpackager -src ./mysources -appClass mypackage.MyApplication -p mobile
  builds all JavaFX and Java sources according to MOBILE profile specification into ./dist/MyApplication.jad and ./dist/MyApplication.jar

compile:
jar:
standard-run:
Exception in thread "main" java.lang.NoClassDefFoundError: javafxapplication2/Main
Java Result: 1
browser-run:
jws-run:
midp-run:
run:
BUILD SUCCESSFUL (total time: 1 second)