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I've opened a few projects from CVS in IDE (nbjunit and all its required). I closed all of them and let IDE opened. After I started cvs update from command line, there occured parsing dialog for closed projects several times and were thrown some exceptions in IDE.
Created attachment 19640 [details] exceptions' stacktraces
Ide holds references to closed projects through TimedSoftReference. AFAIK this is as designed. Anyway IDE should not throw Exceptions. The first Exception is NPE at org.netbeans.modules.javacore.classpath.MergedClassPathImplementation.getRoots(MergedClassPathImplementation.java:474) subsequent exceptions are IOEs.
I cannot reproduce it. I tried to close all ~130 NetBeans projects and did CVS up. I did not see any Exceptions. Please reopen if you are able to reproduce it in latest build.
verified
Reorganization of java component