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In latest Gavotte/5.5.1 build inside composite application project association between EJB project and Java EE Service Engine is broken. Composite application randomly associated with other SE and BC .
Changed below files. http://enterprise.netbeans.org/source/browse/enterprise/compapp/projects/jbi/src/org/netbeans/modules/compapp/projects/jbi/ui/customizer/VisualClassPathItem.java?r1=1.1.2.6.8.3&r2=1.1.2.6.8.4 http://enterprise.netbeans.org/source/browse/enterprise/compapp/projects/jbi/src/org/netbeans/jbi/javeeese/util/ProjectUtil.java?r1=1.1.4.6&r2=1.1.4.7
Verified and working fine. Build# NetBeans IDE Dev (Build 200704121800) 1.6.0_01; Java HotSpot(TM) Client VM 1.6.0_01-b06 Windows XP version 5.1 running on x86 en_US (nb); Cp1252