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In NetBeans build 200509191800 (and all previous ones, probably) the default list of files to exclude from builds is: **/*.java,**/*.form I propose adding **/package.html,**/doc-files/**,**/test-files/** to that list, since "package.html" and "doc-files/*.*" and "test-files/*.*" are usually used to document source code (javadoc standards, see http://java.sun.com/j2se/1.5.0/docs/tooldocs/solaris/javadoc.html#unprocessed ) and should not be included in the jar files by default.