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The external libraries that gets unscrambled maybe only directly under the module directory according to the scrambler proposal: http://nbbuild.netbeans.org/scrambler.html If they are not the preunscramble phase in nbbuild/build.xml fails to find them and user is bothered by the unscrambling dialog in the middle of build process. The cases I observed this are: j2ee/platform/external/j2ee-1_4-fr-spec-license.html j2ee/sunappsrv8/external/license.txt
BTW your list of versions for the j2ee component in Issuezilla has only "current" and "Other". I guess "4.1" (i.e. 4.1 devel trunk) is missing. Please add it and make sure this issue gets that milestone.
s/gets that milestone/gets that version/
fixed
Created attachment 18862 [details] commit log
Ok.