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project.properties contains folowing definitions: dist.dir=dist but next line contains this: dist.jar=dist/JavaApplication0106-1.jar It means that the defined property is not used.
Created attachment 15436 [details] project.properties
The property is OK after project creation, but once you open Project Properties and #1) click on Creating JAR and #2) then on some other panel and #3) then back on Creating JAR, the customizer infrastructure tries to update property although it is not necessary. And that's what I fixed in: src/org/netbeans/modules/java/j2seproject/ui/customizer/VisualPropertySupport.java; new revision: 1.5; previous revision: 1.4
Pavel, Adam, you may want to integrate this trivial change to your copies of project customizer. <http://java.netbeans.org/source/browse/java/j2seproject/src/org/netbeans/modules/java/j2seproject/ui/customizer/VisualPropertySupport.java.diff?r1=1.4&r2=1.5>
Verified in dev-200406230100.