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dev build from May11, jdk1.5.0b50, GTK There is a splitter in Open project dialog between table of files and (checkboxes + list of projects) that can be dragged but the layout is not changed when mouse is released.
If you resize the window, does it then repaint correctly? This could be exactly the same problem as the main window not repainting correctly after all open documents have been closed. I suspect GTK's split pane UI is not repainting when it should.
The bug is in GTK L&F, and is easily reproducible: The JFileChooser UI puts the directory and the file chooser in two sides of a JSplitPane. If you tell it to show only directories, it simply hides the files list, but leaves the JSplitPane there with one half empty. Filed JDK bug 5076494
http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=5074846 verified invalid