This deadlock occurred while I was creating a "Related CMP Beans" in a build from the 
FFJ4.0 trunk (040203).  The schema used to create the set was a dbschema obtained 
from all tables in the Pointbase sample database.  I saw this after hitting Finish on the 
wizard, while it was processing all the tables & creating the ejbs.  The "progress dialog" 
from the wizard stopped updating & never finished.

I only saw this problem once, out of maybe 10 attempts at creating the ejbs & module.

Initial diagnosis from the EJB team:
The deadlock seems to be between the JarFileSystem
and Java parsing code. Seems like the code is trying to
parse one of the .class files in the j2ee-1.3.jar file
and in the process it (the parser) wants to get info on
a folder (in the jar file) but it can't and the deadlock
occurs.