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Unlike the "Run SQL" button in the SQL Command window, the "Run JPQL Query" button doesn't have a shutcut key. Having one, or at least being able to assign one, would greatly improve the window's usability.
there is 219424 issue but I'm not sure it will be fixed in 7.3 proper way, may be will remove shortcut specification instead and return to the issue later, so keep this enhancement open also.
This old bug may not be relevant anymore. If you can still reproduce it in 8.2 development builds please reopen this issue. Thanks for your cooperation, NetBeans IDE 8.2 Release Boss