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[Build 200806300002, JDK 1.5.0] If you call 'Reset windows' in debug, you lose the debug toolbar. Seems to me that the debug toolbar should be left open when in debug, so you dont 'lose control' over the debug session. Sure, you can go to View>Toolbars>Debug, but...
as designed -> WONTFIX. Reset Windows set up all modes, toolbars into the default values. It isn't smart "reset", but hard reset.