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The run configuration is very handy, but it would even be better if it was available in a web-application as well. I have some main classes in my web-app that need parameters for running and the run configuration would be exactly what I need. But as the project is a web application, it is not available.
This old bug may not be relevant anymore. If you can still reproduce it in 8.2 development builds please reopen this issue. Thanks for your cooperation, NetBeans IDE 8.2 Release Boss