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The pom file generated from the wizard includes references to unknown jar files. This only happens with GlassFish 3.x and EE 6 selected. These are all likely related. Please see: http://netbeans.org/bugzilla/show_bug.cgi?id=209573 http://netbeans.org/bugzilla/show_bug.cgi?id=209592
The source of the issue is incorrect pom file and that's the same problem as mentioned issue #209573 with bad Jersey deps . *** This bug has been marked as a duplicate of bug 209573 ***