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It should be possible to drag all windows opened in the same docking area (e.g. the 'output mode') and drop them to a new location. All windows belonging to output area will open in the new location from now on.
core-main 181512dbb5e7
Integrated into 'main-golden' Changeset: http://hg.netbeans.org/main-golden/rev/181512dbb5e7 User: S. Aubrecht <saubrecht@netbeans.org> Log: #198854 - drag and drop the whole docking area